BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G01LP1|AL429942
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1116 1545 0.0
>3x_Contig1116
Length = 5699
Score = 1545 bits (762), Expect = 0.0
Identities = 819/854 (95%), Gaps = 2/854 (0%)
Strand = Plus / Minus
Query: 20 cagcaaagttggaa-aattcctaaagctatttaacccaaatcagtgcaaaaaaatawwma 78
|||||||||||||| |||||||| |||||||||||||| |||||||||||| |||| |
Sbjct: 4381 cagcaaagttggaacaattcctacagctatttaacccacatcagtgcaaaataatattca 4322
Query: 79 awwcacaaccgtttggacaggcagtgcaatwmcwtcaggcatggmaaamtggagtggtac 138
| | ||||||||||||||||||||||||| | |||||||||| ||| |||||||||||
Sbjct: 4321 attcccaaccgtttggacaggcagtgcaattccttcaggcatggcaaactggagtggtac 4262
Query: 139 tgacgcagcacgttatcaccgcggttgawttccatgtgawamcaggtammggaaccttac 198
|||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||
Sbjct: 4261 tgacgcagcacgttatcaccgcggttgatttccatgtgataccaggtaccggaaccttac 4202
Query: 199 tatgcaatgtgaacwgtaaagttagawttgamgaaagtgggaaggataagaacggccagg 258
|||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 4201 tatgcaatgtgaactgtaaagttagatttgacgaaagtgggaaggataagaacggccagg 4142
Query: 259 atagcacagttccagcaaatagtcaggattcacagtcccgcccaggtcagggatcgatta 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 atagcacagttccagcaaatagtcaggattcacagtcccgcccaggtcagggatcgatta 4082
Query: 319 awagtagawcactggataaamcaagamctatatggggtacctactatggtgtctcattam 378
| |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 4081 atagtagatcactggataaaccaagacctatatggggtacctactatggtgtctcattac 4022
Query: 379 agcwagtgcttgaagatmggattttcactaacgacttgaacggagtaatatctagcatga 438
||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4021 agctagtgcttgaagatcggattttcactaacgacttgaacggagtgatatctagcatga 3962
Query: 439 actacacaatagtattcaaaccatcagattctttgatgagcatataagtgctagttgtag 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 actacacaatagtattcaaaccatcagattctttgatgagcatataagtgctagttgtag 3902
Query: 499 gtagcatatagaaatgtgtatgtmcatatatatgtwctatcaaaatattgaagtgtgcat 558
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 3901 gtagcatatagaaatgtgtatgtccatatatatgttctatcaaaatattgaagtgtgcat 3842
Query: 559 tttagcagtgttgagaggcccaaggaactacggaatattctgatcacgtgtatgawcatg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3841 tttagcagtgttgagaggcccaaggaactacggaatattctgatcacgtgtatgatcatg 3782
Query: 619 tttttctggttttcctttcgaagttcttccgtcgtatatgcacgaccaggaaacaccggt 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 tttttctggttttcctttcgaagttcttccgtcgtatatgcacgaccaggaaacaccggt 3722
Query: 679 gtgaaacgttntttgttgagttcggaccttaatatggtcaaaaagatgtgaagatcatat 738
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 gtgaaacgtt-tttgttgagttcggaccttaatatggtcaaaaagatgtgaagatcatat 3663
Query: 739 cacgcgttgggattttaatggtgtacaatcggaatcttgcaaagagtgaaatagaaattt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 cacgcgttgggattttaatggtgtacaatcggaatcttgcaaagagtgaaatagaaattt 3603
Query: 799 aagctatattttttttgttgggtattcgaaccttgtccgtgacagatgcatgaatctgct 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 aagctatattttttttgttgggtattcgaaccttgtccgtgacagatgcatgaatctgct 3543
Query: 859 gcatattttctaag 872
||||||||||||||
Sbjct: 3542 gcatattttctaag 3529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4499
Number of Sequences: 1807
Number of extensions: 4499
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)